BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E04LP1|AL426695
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1415 1532 0.0
>3x_Contig1415
Length = 6436
Score = 1532 bits (773), Expect = 0.0
Identities = 780/781 (99%), Gaps = 1/781 (0%)
Strand = Plus / Minus
Query: 1 ccgattcatttgatacatggcgacaaggacacgatctgtgcagtggaaaagctagcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2549 ccgattcatttgatacatggcgacaaggacacgatctgtgcagtggaaaagctagcacaa 2490
Query: 61 tggcgcacattggaaggagttactgtcacggtagatgtgatcaccgattgttcgcacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2489 tggcgcacattggaaggagttactgtcacggtagatgtgatcaccgattgttcgcacaat 2430
Query: 121 tgtttattagatgcaacagaagaaactctggagctaataatgaagtatacatgaacgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2429 tgtttattagatgcaacagaagaaactctggagctaataatgaagtatacatgaacgtga 2370
Query: 181 aaattggaggagtgaaaaagtcaaaagcagaatcaaatcagatgcacccaaaacgtttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2369 aaattggaggagtgaaaaagtcaaaagcagaatcaaatcagatgcacccaaaacgtttga 2310
Query: 241 gggatattattatctaacaaaagggtgaagtaagaagaaacctgtctttaaaacttatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2309 gggatattattatctaacaaaagggtgaagtaagaagaaacctgtctttaaaacttatac 2250
Query: 301 acacagtgtactatcacacacgagtctaaacataatcagagaaatatatagaaaagataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2249 acacagtgtactatcacacacgagtctaaacataatcagagaaatatatagaaaagataa 2190
Query: 361 tgtgtgaaaaagcaagcacatagattaattggtttttatttcacttaactcataaactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2189 tgtgtgaaaaagcaagcacatagattaattggtttttatttcacttaactcataaactta 2130
Query: 421 gggatgggaattaggacatgcaatcagtttcaaacggatggactctgtttaatccaactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2129 gggatgggaattaggacatgcaatcagtttcaaacggatggactctgtttaatccaactt 2070
Query: 481 gatcctgacggccttgatttgagtgtaagattcgaaagcttcttcacccatttctctacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2069 gatcctgacggccttgatttgagtgtaagattcgaaagcttcttcacccatttctctacc 2010
Query: 541 gtaaccagattgcttgtaaccaccgaatggaacggcagcgtcgaaatcgttgtaagtgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2009 gtaaccagattgcttgtaaccaccgaatggaacggcagcgtcgaaatcgttgtaagtgtt 1950
Query: 601 gatccagacggtaccagcttttagtctctttgcgaccttcaaggcaacggagatgttttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1949 gatccagacggtaccagcttttagtctctttgcgaccttcaaggcaacggagatgttttc 1890
Query: 661 agtttcgataccagcacccaaaccgaattcggagtcgttagccaaagcgaca-cttcgtc 719
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1889 agtttcgataccagcacccaaaccgaattcggagtcgttagccaaagcgacagcttcgtc 1830
Query: 720 gacagtagagaacttggagatggtgacgacaggaccaaagatttcttccttgacgattct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 gacagtagagaacttggagatggtgacgacaggaccaaagatttcttccttgacgattct 1770
Query: 780 c 780
|
Sbjct: 1769 c 1769
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5529
Number of Sequences: 1807
Number of extensions: 5529
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)